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Genomics & Transcriptomics / Microarray

Databases based on microarray data and tools for analyzing that data

GEO GEO

Mining tens of millions of expression profiles

Mining tens of millions of expression profiles

153 Upvoted

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GENE-E GENE-E

Matrix visualization and gene expression analysis software

Matrix visualization and gene expression analysis software

82 Upvoted

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immgene

immgene immgene

Atlas of gene expression in all cell of the mouse immune system

Atlas of gene expression in all cell of the mouse immune system

59 Upvoted

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ArrayExpress ArrayExpress

Find data on functional genomics microarray and sequencing data

Find data on functional genomics microarray and sequencing data

56 Upvoted

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ClustVis

ClustVis ClustVis

Visualize clustering of multivariate data using PCA and heatmaps

Visualize clustering of multivariate data using PCA and heatmaps

55 Upvoted

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PlantGSEA PlantGSEA

Gene set enrichment analysis toolkit for plant community

Gene set enrichment analysis toolkit for plant community

55 Upvoted

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UCSC Microbial...

UCSC Microbial... UCSC Microbial Genome Browser

Window on the biology of more than 400 microbial species from Arc...

Window on the biology of more than 400 microbial species from Archaea and Bacteria

55 Upvoted

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Greengenes Greengenes

Find data on 16S rRNA gene sequence alignment

Find data on 16S rRNA gene sequence alignment

55 Upvoted

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COLT-Cancer

COLT-Cancer COLT-Cancer

Find data on essential genes in human cancer cell lines

Find data on essential genes in human cancer cell lines

53 Upvoted

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CaSNP

CaSNP CaSNP

Explore copy number alterations of cancer genome from SNP array

Explore copy number alterations of cancer genome from SNP array

52 Upvoted

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CircaDB

CircaDB CircaDB

Find data on mammalian circadian gene expression profiles

Find data on mammalian circadian gene expression profiles

52 Upvoted

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BloodExpress

BloodExpress BloodExpress

Find data on gene expression in mouse haematopoiesis

Find data on gene expression in mouse haematopoiesis

47 Upvoted

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