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Proteomics & Metabolomics / Interaction, Network & Pathway

Data and tools for protein interaction prediction, analysis and visualization

KEGG KEGG

Understand high-level functions and utilities of genes

Understand high-level functions and utilities of genes

296 Upvoted

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Cytoscape Cytoscape

Software environment for biomolecular interaction networks

Software environment for biomolecular interaction networks

195 Upvoted

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STRING 10 STRING 10

Find data on known and predicted protein interactions

Find data on known and predicted protein interactions

163 Upvoted

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BioCyc BioCyc

Find Pathway/Genome Databases

Find Pathway/Genome Databases

133 Upvoted

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BioGrid BioGrid

Interaction repository that includes physical and genetic interac...

Interaction repository that includes physical and genetic interactions

106 Upvoted

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DIP

DIP DIP

Find data on experimentally determined protein interactions

Find data on experimentally determined protein interactions

89 Upvoted

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biomodels

biomodels biomodels

Find data on kinetic models of biochemical and cellular systems

Find data on kinetic models of biochemical and cellular systems

71 Upvoted

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Pathway Commons

Pathway Commons Pathway Commons

Search and visualize public biological pathway information

Search and visualize public biological pathway information

56 Upvoted

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NPDock NPDock

Protein-nucleic acid docking

Protein-nucleic acid docking

55 Upvoted

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STITCH STITCH

Explore known and predicted interactions of chemicals and protein...

Explore known and predicted interactions of chemicals and proteins

55 Upvoted

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Perseus

Perseus Perseus

Shotgun proteomics software, to extract biologically meaningful i...

Shotgun proteomics software, to extract biologically meaningful information

55 Upvoted

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IntAct IntAct

Analyze molecular interaction between proteins

Analyze molecular interaction between proteins

55 Upvoted

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