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Proteomics & Metabolomics / Metabolites & Metabolomics

Databases and tools for working with metabolites and metabolomics

BioCyc BioCyc

Find Pathway/Genome Databases

Find Pathway/Genome Databases

133 Upvoted

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HMDB

HMDB HMDB

Human metabolome database

Human metabolome database

120 Upvoted

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ReconMap

ReconMap ReconMap

Genome-scale reconstruction of human metabolism

Genome-scale reconstruction of human metabolism

66 Upvoted

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CAZy

CAZy CAZy

Find data on glycogenomics

Find data on glycogenomics

58 Upvoted

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INMEX INMEX

Web-based tool for integrative meta-analysis of expression data

Web-based tool for integrative meta-analysis of expression data

56 Upvoted

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Shiny GAM Shiny GAM

Integrated analysis of genes and metabolites

Integrated analysis of genes and metabolites

55 Upvoted

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GMM

GMM GMM

Curated metabolic module of the gut microbiome

Curated metabolic module of the gut microbiome

55 Upvoted

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MS2LDA MS2LDA

Topic modelling for substructure discovery in mass spectrometry

Topic modelling for substructure discovery in mass spectrometry

55 Upvoted

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FiehnLib

FiehnLib FiehnLib

Mass spectral and retention index library for comprehensive metab...

Mass spectral and retention index library for comprehensive metabolic profiling

55 Upvoted

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Omix Visualizat... Omix Visualization

Information visualization solutions for systems biology

Information visualization solutions for systems biology

54 Upvoted

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Degradome datab...

Degradome datab... Degradome database

Find data on mammalian proteases and diseases of proteolysis

Find data on mammalian proteases and diseases of proteolysis

53 Upvoted

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Biocatalysis/Bi...

Biocatalysis/Bi... Biocatalysis/Biodegradation Database

Microbial biocatalytic reactions and biodegradation pathways

Microbial biocatalytic reactions and biodegradation pathways

53 Upvoted

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