NCBI Blast NCBI Blast
Search the genome for similarity to a given sequence
Search the genome for similarity to a given sequence
FlexiDot FlexiDot
Highly customizable, ambiguity-aware dotplots for visual sequence...
Highly customizable, ambiguity-aware dotplots for visual sequence analyses
XXmotif XXmotif
Weight matriX-based motif discovery in nucleotide sequences
Weight matriX-based motif discovery in nucleotide sequences
ClustalW ClustalW
Multiple sequence alignment and visual representation for DNA or...
Multiple sequence alignment and visual representation for DNA or proteins
QmRLFS-finder QmRLFS-finder
Prediction and analysis of R-loop forming sequences
Prediction and analysis of R-loop forming sequences
PhylomeDB PhylomeDB
Complete catalogs of gene phylogenies (phylomes)
Complete catalogs of gene phylogenies (phylomes)
GUIDANCE2 GUIDANCE2
Filter or mask unreliably aligned positions in sequence alignment...
Filter or mask unreliably aligned positions in sequence alignments
DIALIGN DIALIGN
Multiple sequence alignment external information
Multiple sequence alignment external information
MISTIC MISTIC
Mutual information server to infer co-evolution
Mutual information server to infer co-evolution
T-Coffee T-Coffee
Popular multiple sequence alignment package for DNA, RNA & protei...
Popular multiple sequence alignment package for DNA, RNA & protein