<% _.each(terms.slice(0, 3), function(term, idx) { %>

<%= term._highlightResult.name.value %>

<% }) %>
Tools People Collections
Discover the best online tools to assist you in research

Enrichr

noun_15445_cc Created with Sketch.
 by Avi Ma'ayan

Description

Enrichr is a neat tool that allows to easily perform gene-set analysis for entered gene lists, and present the results using various graphical options. Additionally, EnrichR allows to download a comprehensive collection of gene-sets employed by the it.

Discussion

Ask a question or post a review

Roy Winters
Research Fellow at University of Melbourne
View profile

Roy Winters

Research Fellow at University of Melbourne

Summarizing report option Oval 17

Is there an option to view/export the entire Enrichr output for all of the sets? it's kind of exhausting to go through all of the sets in order to get a clear picture what's going on in a given set (unless one is seeking a very specific function). Thanks.

upvotecomment_icon_normal 2 upvotes 1 comments Reply
Posted: 2 years ago
Maxim Kuleshov
Bioinformatician at Icahn School of Medicine at Mount Sinai
View profile

Maxim Kuleshov

Bioinformatician at Icahn School of Medicine at Mount Sinai

Hi Roy,
You could use API for batch submission and downloading results. Enrichr has a manual in 'API Documentation' - 'Download file of enrichment results' section of Help http://amp.pharm.mssm.edu/Enrichr/help#api&q=5

upvotecomment_icon_normal 2 upvotes Reply
Posted: 2 years ago
Alon Vitenshtein
Co-founder of LabWorm
View profile

Alon Vitenshtein

Co-founder of LabWorm

Why I love Enrichr Oval 17

Everyone, this week we present to you a special treat, Enrichr, which y'all simply must check out. It solves the nagging need we continually encounter, finding a good tool to analyse gene sets.

Enrichr gets you all the data you can dream of for your gene sets: transcription factors, pathways, gene ontologies, cell types, involvement in diseases and drugs, and much much more. It's so much more impressive when you see the clean, easy to understand and modern design, and it even has a version you can see on your mobile phone. Not very typical in our field of work.

So Kudos to Avi Ma'ayan and his team!

upvotecomment_icon_normal 5 upvotes 0 comments Reply
Posted: 2 years ago
73  upvotes
8 collections
379 views
Show more

Associated keywords

Genes Collections Gene Expression

Similar/Related tools

Additional content

  • Enrichr demo video