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Trinity

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 by Brian Haas

Description

Efficient and robust de novo reconstruction of transcriptomes from RNA-seq data

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Arun Seetharam
Researcher at Iowa State University
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Arun Seetharam

Researcher at Iowa State University

My go-to tool for de-novo transcriptome assembly! Oval 17

easy to install, fast execution time, intuitive parameters and a great support makes this program my default choice for RNAseq assembly projects. We only use other programs if the PI specifically requests us to use a different program for whatever the reason! The best part is that that there is a whole suite of scripts for performing all sorts of downstream analysis that adds so much value to the results! Highly recommend this program!

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Posted: 4 years ago
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Associated keywords

RNA-Seq

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