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XenofilteR

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Suggested by: Avital Cher

Description

XenofilteR is an R-package for filtering host from graft reads in next generation sequence data. XenofilteR is a novel method that utilizes the edit distance of each read for classification. XenofilteR outperforms existing methods as validated on artificially mixed mouse/human samples and sets of patient derived xenograft samples.

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Associated keywords

Heterografts Transplants